BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C01SP1|AL429869
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig949 1678 0.0
>3x_Contig949
Length = 3686
Score = 1678 bits (846), Expect = 0.0
Identities = 847/848 (99%)
Strand = Plus / Plus
Query: 1 gatcttcaatcaattccttgacagttctcaagaaagtaacagcctctctaccatccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 gatcttcaatcaattccttgacagttctcaagaaagtaacagcctctctaccatccaaca 1780
Query: 61 acctatggtcataagtcaaagccaagtacatcattggtctagagacgatttgaccattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 acctatggtcataagtcaaagccaagtacatcattggtctagagacgatttgaccattaa 1840
Query: 121 cagtgacaggtctttccttaacaccgtgcaaacctaaaacagccgtttgtggcatgttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 cagtgacaggtctttccttaacaccgtgcaaacctaaaacagccgtttgtggcatgttaa 1900
Query: 181 tgattggggtaccgtacaatgaaccgaagacaccaccgttagagatggtgaaagtaccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 tgattggggtaccgtacaatgaaccgaagacaccaccgttagagatggtgaaagtaccac 1960
Query: 241 cagccatatcttccaaagtcaacttaccatctctggccttcttacccaatctgacaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 cagccatatcttccaaagtcaacttaccatctctggccttcttacccaatctgacaattt 2020
Query: 301 cttgttcaatttctaaaacagacaatgattcagcgttacgaaccactggggtaaccaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 cttgttcaatttctaaaacagacaatgattcagcgttacgaaccactggggtaaccaaac 2080
Query: 361 cctttggagtagcgacagcratagagatatcggtgtaatcacggtaaaggatttgatctc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 cctttggagtagcgacagcgatagagatatcggtgtaatcacggtaaaggatttgatctc 2140
Query: 421 cggagatagcaccatttacagctggaatatccttagcggccaaagtacaagccttagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 cggagatagcaccatttacagctggaatatccttagcggccaaagtacaagccttagaga 2200
Query: 481 aaagacccatgaaaccgaatttaacgttcttagtcttgatgatttcatctttgtataatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 aaagacccatgaaaccgaatttaacgttcttagtcttgatgatttcatctttgtataatt 2260
Query: 541 ttctcatttccaagacagcggacatgtcaacttcgttgaaagtggtcaaagaagcagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 ttctcatttccaagacagcggacatgtcaacttcgttgaaagtggtcaaagaagcagcag 2320
Query: 601 tgttttgagattcctttaatctttcagcgattctcattctcatacggttcatcttgacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2321 tgttttgagattcctttaatctttcagcgattctcattctcatacggttcatcttgacct 2380
Query: 661 tatgttcgttacgggagaattgagtgaaagatggggtagaggattcagtagcagatgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2381 tatgttcgttacgggagaattgagtgaaagatggggtagaggattcagtagcagatgagt 2440
Query: 721 caacttcagtcttctttggagcagcagcggctggtttttcctccttctttggagctggag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2441 caacttcagtcttctttggagcagcagcggctggtttttcctccttctttggagctggag 2500
Query: 781 cagcggccttttcttccttctttggagtggctggttgctcttccttcttaggagcagcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2501 cagcggccttttcttccttctttggagtggctggttgctcttccttcttaggagcagcct 2560
Query: 841 gttgttgc 848
||||||||
Sbjct: 2561 gttgttgc 2568
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6619
Number of Sequences: 1807
Number of extensions: 6619
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)